hpa version 24 1 single cell transcriptomics dataset (Human Protein Atlas)
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Human Protein Atlas
hpa version 24 1 single cell transcriptomics dataset
Hpa Version 24 1 Single Cell Transcriptomics Dataset, supplied by Human Protein Atlas, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/single-cell+transcriptomics/data+rna+seq/pm42297981-473-31-28
Average 86 stars, based on 1 article reviews
Hpa Version 24 1 Single Cell Transcriptomics Dataset, supplied by Human Protein Atlas, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/single-cell+transcriptomics/data+rna+seq/pm42297981-473-31-28
Average 86 stars, based on 1 article reviews
hpa version 24 1 single cell transcriptomics dataset - by Bioz Stars,
2026-11
86/100 stars
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Single Cell:Article Title: Air pollution and COPD: Unveiling the mechanisms through network toxicology and transcriptomics. Article Snippet: .. Single-cell analysis of candidate targets The transcript expression levels of candidate targets in human lung cells were annotated using consensus-based tissue gene data and Article Title: Plasma proteomic signatures of cellular aging predict human disease. Article Snippet: .. Nature Medicine Article https://doi.org/10.1038/s41591-026-04446-y Extended Data Fig. 1 | Identification of cell type-specific plasma proteins. (a) Z-scored gene expression of cell type-enriched plasma protein encoding genes in the Human Protein Atlas ( Expressing:Article Title: Air pollution and COPD: Unveiling the mechanisms through network toxicology and transcriptomics. Article Snippet: .. 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According to the Human Protein Atlas , the expression of Article Title: TMBIM6 enhances dopaminergic neuron survival by modulating the IRE1a pathway in Parkinson’s disease Article Snippet: .. Using data on Transcriptomics:Article Title: Air pollution and COPD: Unveiling the mechanisms through network toxicology and transcriptomics. Article Snippet: .. Single-cell analysis of candidate targets The transcript expression levels of candidate targets in human lung cells were annotated using consensus-based tissue gene data and Article Title: Plasma proteomic signatures of cellular aging predict human disease. Article Snippet: .. Nature Medicine Article https://doi.org/10.1038/s41591-026-04446-y Extended Data Fig. 1 | Identification of cell type-specific plasma proteins. (a) Z-scored gene expression of cell type-enriched plasma protein encoding genes in the Human Protein Atlas ( Clinical Proteomics:Article Title: Plasma proteomic signatures of cellular aging predict human disease. Article Snippet: .. Nature Medicine Article https://doi.org/10.1038/s41591-026-04446-y Extended Data Fig. 1 | Identification of cell type-specific plasma proteins. (a) Z-scored gene expression of cell type-enriched plasma protein encoding genes in the Human Protein Atlas ( Gene Expression:Article Title: Plasma proteomic signatures of cellular aging predict human disease. Article Snippet: .. Nature Medicine Article https://doi.org/10.1038/s41591-026-04446-y Extended Data Fig. 1 | Identification of cell type-specific plasma proteins. (a) Z-scored gene expression of cell type-enriched plasma protein encoding genes in the Human Protein Atlas ( Labeling:Article Title: Plasma proteomic signatures of cellular aging predict human disease. Article Snippet: .. Nature Medicine Article https://doi.org/10.1038/s41591-026-04446-y Extended Data Fig. 1 | Identification of cell type-specific plasma proteins. (a) Z-scored gene expression of cell type-enriched plasma protein encoding genes in the Human Protein Atlas ( other:Article Title: Integrated machine learning and multi-omics analysis identifies ALOX5 as a potential therapeutic target for tubulointerstitial inflammation in diabetic kidney disease. Article Snippet: Notably, CD163 staining did not show significant positivity, indicating a low proportion148 of CD163+ macrophages in the tissue, which correlates with the limited numbers of Mouse Assay:Article Title: Citrate clearance is a major function of aconitase 2 in the canonical TCA cycle. Article Snippet: .. STAR★METHODS Detailed methods are provided in the online version of this paper and include the following: • KEY RESOURCES TABLE • EXPERIMENTAL MODEL AND STUDY PARTICIPANT DETAILS ○ Mice ○ Cell lines • METHOD DETAILS ○ DepMap data analysis ○ Generation of genetically edited lines ○ Western blotting ○ Viability assay ○ MitoTracker and TMRE assays ○ L-HPG nascent protein synthesis assay ○ OP-puro assay ○ EdU incorporation flow cytometry assay ○ Flow-based competition assay ○ Proliferation analyses ○ Oxygen consumption and extracellular acidification rates ○ Isotope tracing and steady-state metabolite measurement ○ Citrate uptake assays ○ GC-MS analysis ○ Pathology ○ Immunohistochemistry ○ RNA isolation and qPCR ○ RNA-sequencing and Western Blot:Article Title: Citrate clearance is a major function of aconitase 2 in the canonical TCA cycle. Article Snippet: .. STAR★METHODS Detailed methods are provided in the online version of this paper and include the following: • KEY RESOURCES TABLE • EXPERIMENTAL MODEL AND STUDY PARTICIPANT DETAILS ○ Mice ○ Cell lines • METHOD DETAILS ○ DepMap data analysis ○ Generation of genetically edited lines ○ Western blotting ○ Viability assay ○ MitoTracker and TMRE assays ○ L-HPG nascent protein synthesis assay ○ OP-puro assay ○ EdU incorporation flow cytometry assay ○ Flow-based competition assay ○ Proliferation analyses ○ Oxygen consumption and extracellular acidification rates ○ Isotope tracing and steady-state metabolite measurement ○ Citrate uptake assays ○ GC-MS analysis ○ Pathology ○ Immunohistochemistry ○ RNA isolation and qPCR ○ RNA-sequencing and Article Title: Systems Biology Identifies TARS2 as a Cardiomyocyte Regulator of Mitochondrial Oxidative Stress in Dilated Cardiomyopathy Article Snippet: .. The purple-shaded region encloses CMs. (E) Schematic representation of the experimental workflow for isolating CMs and non-CMs from adult mouse hearts. (F) (Top) Representative Western blot images showing Viability Assay:Article Title: Citrate clearance is a major function of aconitase 2 in the canonical TCA cycle. Article Snippet: .. STAR★METHODS Detailed methods are provided in the online version of this paper and include the following: • KEY RESOURCES TABLE • EXPERIMENTAL MODEL AND STUDY PARTICIPANT DETAILS ○ Mice ○ Cell lines • METHOD DETAILS ○ DepMap data analysis ○ Generation of genetically edited lines ○ Western blotting ○ Viability assay ○ MitoTracker and TMRE assays ○ L-HPG nascent protein synthesis assay ○ OP-puro assay ○ EdU incorporation flow cytometry assay ○ Flow-based competition assay ○ Proliferation analyses ○ Oxygen consumption and extracellular acidification rates ○ Isotope tracing and steady-state metabolite measurement ○ Citrate uptake assays ○ GC-MS analysis ○ Pathology ○ Immunohistochemistry ○ RNA isolation and qPCR ○ RNA-sequencing and Flow Cytometry:Article Title: Citrate clearance is a major function of aconitase 2 in the canonical TCA cycle. Article Snippet: .. 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STAR★METHODS Detailed methods are provided in the online version of this paper and include the following: • KEY RESOURCES TABLE • EXPERIMENTAL MODEL AND STUDY PARTICIPANT DETAILS ○ Mice ○ Cell lines • METHOD DETAILS ○ DepMap data analysis ○ Generation of genetically edited lines ○ Western blotting ○ Viability assay ○ MitoTracker and TMRE assays ○ L-HPG nascent protein synthesis assay ○ OP-puro assay ○ EdU incorporation flow cytometry assay ○ Flow-based competition assay ○ Proliferation analyses ○ Oxygen consumption and extracellular acidification rates ○ Isotope tracing and steady-state metabolite measurement ○ Citrate uptake assays ○ GC-MS analysis ○ Pathology ○ Immunohistochemistry ○ RNA isolation and qPCR ○ RNA-sequencing and Immunohistochemistry:Article Title: Citrate clearance is a major function of aconitase 2 in the canonical TCA cycle. Article Snippet: .. STAR★METHODS Detailed methods are provided in the online version of this paper and include the following: • KEY RESOURCES TABLE • EXPERIMENTAL MODEL AND STUDY PARTICIPANT DETAILS ○ Mice ○ Cell lines • METHOD DETAILS ○ DepMap data analysis ○ Generation of genetically edited lines ○ Western blotting ○ Viability assay ○ MitoTracker and TMRE assays ○ L-HPG nascent protein synthesis assay ○ OP-puro assay ○ EdU incorporation flow cytometry assay ○ Flow-based competition assay ○ Proliferation analyses ○ Oxygen consumption and extracellular acidification rates ○ Isotope tracing and steady-state metabolite measurement ○ Citrate uptake assays ○ GC-MS analysis ○ Pathology ○ Immunohistochemistry ○ RNA isolation and qPCR ○ RNA-sequencing and Article Title: Systems Biology Identifies TARS2 as a Cardiomyocyte Regulator of Mitochondrial Oxidative Stress in Dilated Cardiomyopathy Article Snippet: .. The purple-shaded region encloses CMs. (E) Schematic representation of the experimental workflow for isolating CMs and non-CMs from adult mouse hearts. (F) (Top) Representative Western blot images showing Article Title: Nitidine chloride suppresses polo-like kinase 1 via MYCN-associated transcriptional regulation in colorectal cancer: a multi-omics and spatial transcriptomics study Article Snippet: .. Isolation:Article Title: Citrate clearance is a major function of aconitase 2 in the canonical TCA cycle. Article Snippet: .. STAR★METHODS Detailed methods are provided in the online version of this paper and include the following: • KEY RESOURCES TABLE • EXPERIMENTAL MODEL AND STUDY PARTICIPANT DETAILS ○ Mice ○ Cell lines • METHOD DETAILS ○ DepMap data analysis ○ Generation of genetically edited lines ○ Western blotting ○ Viability assay ○ MitoTracker and TMRE assays ○ L-HPG nascent protein synthesis assay ○ OP-puro assay ○ EdU incorporation flow cytometry assay ○ Flow-based competition assay ○ Proliferation analyses ○ Oxygen consumption and extracellular acidification rates ○ Isotope tracing and steady-state metabolite measurement ○ Citrate uptake assays ○ GC-MS analysis ○ Pathology ○ Immunohistochemistry ○ RNA isolation and qPCR ○ RNA-sequencing and Real-time Polymerase Chain Reaction:Article Title: Citrate clearance is a major function of aconitase 2 in the canonical TCA cycle. Article Snippet: .. STAR★METHODS Detailed methods are provided in the online version of this paper and include the following: • KEY RESOURCES TABLE • EXPERIMENTAL MODEL AND STUDY PARTICIPANT DETAILS ○ Mice ○ Cell lines • METHOD DETAILS ○ DepMap data analysis ○ Generation of genetically edited lines ○ Western blotting ○ Viability assay ○ MitoTracker and TMRE assays ○ L-HPG nascent protein synthesis assay ○ OP-puro assay ○ EdU incorporation flow cytometry assay ○ Flow-based competition assay ○ Proliferation analyses ○ Oxygen consumption and extracellular acidification rates ○ Isotope tracing and steady-state metabolite measurement ○ Citrate uptake assays ○ GC-MS analysis ○ Pathology ○ Immunohistochemistry ○ RNA isolation and qPCR ○ RNA-sequencing and RNA sequencing:Article Title: Citrate clearance is a major function of aconitase 2 in the canonical TCA cycle. Article Snippet: .. STAR★METHODS Detailed methods are provided in the online version of this paper and include the following: • KEY RESOURCES TABLE • EXPERIMENTAL MODEL AND STUDY PARTICIPANT DETAILS ○ Mice ○ Cell lines • METHOD DETAILS ○ DepMap data analysis ○ Generation of genetically edited lines ○ Western blotting ○ Viability assay ○ MitoTracker and TMRE assays ○ L-HPG nascent protein synthesis assay ○ OP-puro assay ○ EdU incorporation flow cytometry assay ○ Flow-based competition assay ○ Proliferation analyses ○ Oxygen consumption and extracellular acidification rates ○ Isotope tracing and steady-state metabolite measurement ○ Citrate uptake assays ○ GC-MS analysis ○ Pathology ○ Immunohistochemistry ○ RNA isolation and qPCR ○ RNA-sequencing and Single-cell Transcriptomics:Article Title: Citrate clearance is a major function of aconitase 2 in the canonical TCA cycle. Article Snippet: .. STAR★METHODS Detailed methods are provided in the online version of this paper and include the following: • KEY RESOURCES TABLE • EXPERIMENTAL MODEL AND STUDY PARTICIPANT DETAILS ○ Mice ○ Cell lines • METHOD DETAILS ○ DepMap data analysis ○ Generation of genetically edited lines ○ Western blotting ○ Viability assay ○ MitoTracker and TMRE assays ○ L-HPG nascent protein synthesis assay ○ OP-puro assay ○ EdU incorporation flow cytometry assay ○ Flow-based competition assay ○ Proliferation analyses ○ Oxygen consumption and extracellular acidification rates ○ Isotope tracing and steady-state metabolite measurement ○ Citrate uptake assays ○ GC-MS analysis ○ Pathology ○ Immunohistochemistry ○ RNA isolation and qPCR ○ RNA-sequencing and Staining:Article Title: Systems Biology Identifies TARS2 as a Cardiomyocyte Regulator of Mitochondrial Oxidative Stress in Dilated Cardiomyopathy Article Snippet: .. The purple-shaded region encloses CMs. (E) Schematic representation of the experimental workflow for isolating CMs and non-CMs from adult mouse hearts. (F) (Top) Representative Western blot images showing In Silico:Article Title: TMBIM6 enhances dopaminergic neuron survival by modulating the IRE1a pathway in Parkinson’s disease Article Snippet: .. Using data on |